dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02023
Location and strand information: 26028 - 26849 (+)
Family: 2.A.64.3.2
Protein type: TC
Protein description: Sec-independent protein translocase protein TatC

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02024
Location and strand information: 26849 - 30241 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02025
Location and strand information: 30287 - 30379 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02026
Location and strand information: 30660 - 32177 (-)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02027
Location and strand information: 32479 - 33699 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.115
Protein molecular weight: 47104.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02028
Location and strand information: 33704 - 34672 (+)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.5618
Protein molecular weight: 36256.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02029
Location and strand information: 34787 - 35134 (-)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02030
Location and strand information: 35282 - 37048 (+)
Family: CE12|CE8|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2129
Protein molecular weight: 65363.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02031
Location and strand information: 37094 - 38410 (+)
Family: CE7
Protein type: CAZyme
Protein description: Acetyl esterase Axe7A
Protein isoelectric point: 8.0888
Protein molecular weight: 49373.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02032
Location and strand information: 38676 - 42017 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02033
Location and strand information: 42049 - 44178 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02034
Location and strand information: 44180 - 45343 (+)
Family: CE19|PL10_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8752
Protein molecular weight: 43421.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02035
Location and strand information: 45545 - 49966 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02036
Location and strand information: 50052 - 54503 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02037
Location and strand information: 54535 - 56127 (-)
Family: PL10|PL10_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8182
Protein molecular weight: 60871.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_8|CGC1
Gene ID: MGYG000002455_02038
Location and strand information: 56134 - 57639 (-)
Family: GH43_9|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 7.2365
Protein molecular weight: 58112.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002455_02027	GH105_e8\|3.2.1.-	pectin
MGYG000002455_02028	CE8_e34
MGYG000002455_02030	CE8_e6\|CE4_e36\|CE12_e9
MGYG000002455_02031	CE7_e24
MGYG000002455_02034
MGYG000002455_02037	PL10_e15\|4.2.2.2	pectin
MGYG000002455_02038	GH43_e83

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002455_02023	Sec-independent protein translocase protein TatC	TC	26028	26849	+	2.A.64.3.2
MGYG000002455_02024	hypothetical protein	null	26849	30241	+	AAA_11\| AAA_11\| AAA_12
MGYG000002455_02025	hypothetical protein	null	30287	30379	-	No domain
MGYG000002455_02026	Hexuronate transporter	TC	30660	32177	-	2.A.1.14.25
MGYG000002455_02027	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	32479	33699	+	GH105
MGYG000002455_02028	Pectinesterase A	CAZyme	33704	34672	+	CE8
MGYG000002455_02029	hypothetical protein	STP	34787	35134	-	AraC_binding
MGYG000002455_02030	hypothetical protein	CAZyme	35282	37048	+	CE12\| CE8\| CE4
MGYG000002455_02031	Acetyl esterase Axe7A	CAZyme	37094	38410	+	CE7
MGYG000002455_02032	TonB-dependent receptor SusC	TC	38676	42017	+	1.B.14.6.1
MGYG000002455_02033	hypothetical protein	null	42049	44178	+	SusD_RagB
MGYG000002455_02034	hypothetical protein	CAZyme	44180	45343	+	CE19\| PL10_1
MGYG000002455_02035	Sensor histidine kinase RcsC	TF	45545	49966	-	HTH_AraC+HTH_AraC
MGYG000002455_02036	Sensor histidine kinase RcsC	TF	50052	54503	+	HTH_AraC
MGYG000002455_02037	hypothetical protein	CAZyme	54535	56127	-	PL10\| PL10_2
MGYG000002455_02038	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	56134	57639	-	GH43_9\| GH43
Protein ID	Protein Name	Type	Start	End	Strand	Signature